ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

version 3 (curated until May 28, 2011)
A history of ApiLoc..

May 28, 2011 (version 3)

Data Updates

  • Updated umbrella localisations of some previously "other" localisations

Total Data

ApiLoc turns 1000!
SpeciesLocalised genesPublications curated
Babesia bigemina11
Babesia bovis1512
Babesia divergens11
Babesia equi22
Babesia gibsoni75
Cryptosporidium hominis00
Cryptosporidium muris00
Cryptosporidium parvum2127
Eimeria ascervulina11
Eimeria maxima22
Eimeria tenella1613
Neospora caninum2123
Plasmodium berghei6165
Plasmodium chabaudi45
Plasmodium cynomolgi11
Plasmodium falciparum457399
Plasmodium gallinaceum67
Plasmodium knowlesi64
Plasmodium malariae11
Plasmodium vivax1815
Plasmodium yoelii2925
Sarcocystis muris32
Sarcocystis neurona22
Theileria annulata119
Theileria lestoquardi11
Theileria parva43
Toxoplasma gondii319218
Total1010844

Website Updates

Among other things,
  • Versions page for historical reasons
  • Links to FullText linkouts using Entrez EUtils
  • Added ability to annotate multiple genes at once
  • Added BLAST for BLASTing against all localised proteins

23 September, 2010 (version 2)

Total Data

download
SpeciesLocalised genesPublications curated
Babesia bigemina11
Babesia bovis129
Babesia divergens11
Babesia equi22
Babesia gibsoni64
Cryptosporidium hominis00
Cryptosporidium parvum2126
Eimeria ascervulina11
Eimeria maxima22
Eimeria tenella1613
Neospora caninum1416
Plasmodium berghei5861
Plasmodium chabaudi45
Plasmodium cynomolgi11
Plasmodium falciparum424367
Plasmodium gallinaceum67
Plasmodium malariae11
Plasmodium vivax1210
Plasmodium yoelii2724
Sarcocystis muris32
Sarcocystis neurona22
Theileria annulata119
Theileria lestoquardi11
Theileria parva32
Toxoplasma gondii272196
Total901763

Website Updates

Among other things,
  • Curation detail included on gene pages, and not just publication pages
  • Fixed issue where gene pages for genes without OrthoMCL groups gave errors