ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

version 3 (curated until May 28, 2011)

TGME49_065250 ()

alpha-1 type II collagen, putative, a gene from Toxoplasma gondii

Compiled localisation

Who localised this protein by microscopy?

No manually curated localisations are recorded in ApiLoc, sorry.

Orthology

OrthoMCL

Part of OrthoMCL group OG4_115349

Localised Genes in this Group
    No apicomplexan genes in this OrthoMCL group have been localised.
Other Apicomplexan Genes in this Group
Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms
    There are no non-apicomplexan genes that have manually annotated evidence codes.

Amino Acid Sequence

>TGME49_065250 alpha-1 type II collagen, putative
MTQGSTEPALPVAEGGKCEETVLSSPADAAPKSTPSDSPSCSVVPPGAAAPPSDTPDKQAPSEKQEARTSTLSAKHEEGA
ARAQPEATPGPGKSQEEETGDGSASPASAGKKEEKSGETTTSTVRVHRWADESDDLDSPSFDPMSSAEVEPPEFDLGMSG
YQPPSVRSTGNGIVSHADAGGYRRGVPGQSSFSGGYGGLVDSRFGGLVNPPHGHPHGPPASVGLGDGGFMQGGVTGPFTE
VYVAELDAHVTEEDVSSIFAPGLTVRNVRIVREQANRGNKGGPNATCGAYVTFHSPEDAQRALAFHGKLYRPPRGAGLSS
SQGLRGSSRQAGSGGSGVSARVLRISAISSPPLLSGEGGSPYLLSRATRSGSLGHLHSAGSPHLLPRGGRGFGGVYGQAV
ADLHQQAASLPYRSNGAAPGPGPAGPQGGRKGFPGDESARGDRGREPDGTGKAGGAGFGAGRRKKSKSPDFSELRKETGA
GTARSPGAGAPDQKARGRDEPSGAGAGPRAAAAGDKEETAPPEPPRERPKLLLKPRSKPLDAAAEPPKLNPAIFGAAKPI
DDPVAKRQPTGSGASPAFGDSLATASSERRASGAGPVSPRGETGAGLGPADMSVPSLKRGDAAKGRGAAEKPADKETRGP
RGASARGSVLFARREETQTGTTEDGRQKGRAGGSQKGPEGGEQTTAAHTHPGPGRDRGEKERDEWSGLYSGAWRHSAERH
AEKDAGEDPSAGAKGHQALQEDEHGRRTSGIAKGEARTETERKPSRTGDPFGGARPRDEFEWQRKKEAAGTPSVLPEDPV
RVSPLQHPPLSPYLPHGAHSGRPATGFLPPSYASYGSQSEIGSHTGALGPRGSDESARTPPSGTPDGGNSSRGILGPSPS
ARSGSGAATAVGVLSGSGASPSGAPAKGSNSMGRGPGSLAPIPVGPGGPPGSPLKGVAQTPPRSGVASSLQPSPNASPSM
GPGIWGRSVQGSPPMQKGDGAPRGGSGGRPASPAGAQKEPLWRSSVSAGPRGAGAGPHDSPSLLPGGGRGVCRPTVNNQA
GEGLLPVGRGADGKEQDRTALSGDGVLAAPMPRGESEEGRGAPGPAGPTPGSYDGVASWARKPQNPIHVRAVQTVVLAGG
GEQTSMLPLLSAEGPQDRGARETGRGEARETGPQADRPSGIRSLAEQLLPSQATDVKGKAADEKEEEKKKENKIPDILSK
PEQKQGQTVWEARNEVLGLAKRDAGATEETVEVGDSLEGREETGRTSQAPKSAPREGSNEETPGTSGAASDSQGEEEGRE
GDRGKGRRSVQPHDREVRGQAQSAYERGGRSSGYGRVKGEETPHSFQVARGYDGGPEKRDEEGRRTAGHRDARGGRGGRF
RGGERTRWRRYPGDGGDATPSERTGDDQGTNATGDQRFQHAETPETPNGDDAEQNCQGAKASSQCEGEGEKGRRRGEAQA
SSPVHDFPQAEKSFRRRGGDRGRSMWRGVDGRPDGAGRGRGGRKLRGDGIGISNGHQPGRHTPGHRREQPGAAEEEREQD
SQAPTPRVPARAMLPQAATGSTGVKTNNRFSAFAADSDEGESSD

Gene-Specific Links for TGME49_065250

General Sub-Cellular Localisation Links

  • TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
  • OrthoMCL, automatic clustering of orthologous groups of proteins