ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

version 3 (curated until May 28, 2011)

TGME49_040460 (AP2VI-1)

malaria antigen, putative, a gene from Toxoplasma gondii

Compiled localisation
nucleus during s phase of intracellular tachyzoite
during not g1 phase of intracellular tachyzoite and not mitosis of intracellular tachyzoite

Who localised this protein by microscopy?

Behnke, M. S., Wootton, J. C., Lehmann, M. M., Radke, J. B., Lucas, O., Nawas, J., Sibley, L. D., White, M. W.
Coordinated progression through two subtranscriptomes underlies the tachyzoite cycle of Toxoplasma gondii. (2010, PLoS One) PubMed / full text
   more detail about this publication

nucleus during s phase of intracellular tachyzoite, during not g1 phase of intracellular tachyzoite and not mitosis of intracellular tachyzoite
  • "All tagged AP2 proteins were localized to the parasite nucleus."
  • Microscopy type: fixed light
  • Microscopy method: antibody to YFP tag
  • Strain: RH Ku80-
  • Gene model mapping comments: Taken directly from publication
  • Localisation record: nucleus during S phase of intracellular tachyzoite, not during G1 phase of intracellular tachyzoite, not during mitosis of intracellular tachyzoite
  • Other genes localised in this publication: hypothetical protein, hypothetical protein, hypothetical protein, hypothetical protein

Orthology

OrthoMCL

Part of OrthoMCL group OG4_114579

Localised Genes in this Group
Other Apicomplexan Genes in this Group
Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms
    There are no non-apicomplexan genes that have manually annotated evidence codes.

Amino Acid Sequence

>TGME49_040460 malaria antigen, putative
MDVSREGNTPNSVVPTHLPHLDICWGATANVSGWPAADVLPDPAQLPIFCRNVDAESTDVDNSSTSGKGCTTRTCCTEDE
FPLEGEKQEATEAYSEMAKKLPKLAGVIFDRVHARWVSTYHDKETRKVMRKYFGVRKHGFEQAYKMAVQHRKLKIMSKHS
ENDPETRLHDGLRQNSGDMSFRDASGSVEEETDGMNKNVCYETLFKTLPRVTGVSYDSYAMKFRAGFMSNGKWNVKDFPI
RKYGTFAEAYRRAVSCRQGNSRADFSRKCDGSTKTAAVAEVSAAHA

Gene-Specific Links for TGME49_040460

General Sub-Cellular Localisation Links

  • TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
  • OrthoMCL, automatic clustering of orthologous groups of proteins