ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

version 3 (curated until May 28, 2011)

TGME49_005010 ()

splicing factor 3B subunit 1, putative, a gene from Toxoplasma gondii

Compiled localisation

Who localised this protein by microscopy?

No manually curated localisations are recorded in ApiLoc, sorry.

Orthology

OrthoMCL

Part of OrthoMCL group OG4_11351

Localised Genes in this Group
    No apicomplexan genes in this OrthoMCL group have been localised.
Other Apicomplexan Genes in this Group
Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms

Amino Acid Sequence

>TGME49_005010 splicing factor 3B subunit 1, putative
MENNGSSGKNQPSSTAAATDSAGVAFDSHIYGETPAAHYVTEIDAETPLVAQDGGSGSAVSRASRSGQRSTEDGARIAER
ERMLMAQQGDGVEATGVDKSIAAREDFYRRQRFQRALSPERADPFSDGDLGAASRGESARTYADVMLEQHLDREKQAAVR
QIRKLQEDAELQRQLQMQKQLGGGDGSEKKRRRWDWGTAGAEDEGLTEAERQELARAKAQGGGKSEEGAAAAAAALVSRW
DTPLHAGGQTPGAWGETPLVAGSDSREGAGARTGLGAAPGKKKSRWDATPTIGGTGQETPTPGQWGATPAVDQAGTPILA
GAGSVTPMAPGAGSGNVTPMIAPGSQTPSMGRKRSRWDATPVLGGSDADMAAAAAAGLTPGASTPMTGGAGMTPGKDGST
PMTSQLTPGMTPLAVTGMVGATPLTPGTPISTAEQLLQLRMQQEQDERTRYLTDEELDRLLPKEGYEIVPPPADYNPPPS
SAAAAAARARHQAIGMTPGVAATPTPIGVTPLYTMPEEGVIPGGMEGLMTMGGGIGGQLTAEGGGVTMKAEDYQFFAKLF
EDKDEDAMTQEEVKERKIQLLLLKIKNGTPPLRRSALRTLTEKSKEFGAAALFNQILPLMMQSTLEDQERHLLVKVIDRV
LYRLDDAVRPYVHKILVVIEPLLIDEDYYARIEGREIISNLAKAAGLATMIATMRPDIDHPDEYVRNTTARAFAVVASAL
GIPSLILFLKAVCQSKKSWQARHTGIKIIQQMSILMGCGVLPHLKQLVEIIQHGLDDQVLKVKTVTALALAALAESAAPY
GIEAFDSVLRPLWKGMGEMRGKGLAAYLKAIGSIIPLMDAYHASYYTREVMVMLVREFETNDEEMKKIVLRVVRQCVATE
GVESEYIRTDIVPPFFAKVWLVRNALDRRTAKLLIETVVEIANKAGGAHIIQQIVEDLKDPSEPFRKVTLEALEQIIVNN
GVVDVDNRLEEQLVDGLLYAFQEQTSEDATALLNGFSTIVNALGTRIKPYLPQICGVIRWRLNTPSAKLRQQAADLIARI
AVVMQKCGEEQMLGHLGLFLYEYLGEEYPEVLGSILGALKAIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENVIDL
VGRIADRGGDLVSPKEWDRICFDLLDMLKASKKAIRRATVNTFGYIARTIGPQDVLATLLNNLKVQERQLRLCTTIAIAI
VAETCLPYSVLPALMNEYRVQELNVQNGVLKTLSFMFEYIGEMAKDYIYTVVPLLEDALMDRDLVHRQTAAWATKHLALG
VHGLSCEDALLHLMNFVWPNIFEKSPHLVQAFFDAVDGMRVSLGAGIVFRYVLLGLFHPAKKVREVYWRVYNNLYIGHQD
SMVAFYPPLPDDEKGCYSRDELLYVI

Gene-Specific Links for TGME49_005010

General Sub-Cellular Localisation Links

  • TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
  • OrthoMCL, automatic clustering of orthologous groups of proteins