ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

Orthology

OrthoMCL

Part of OrthoMCL group OG4_10559

Localised Genes in this Group

• TGME49_066760 (ICDH1): apicoplast periphery during intracellular tachyzoite
• TGME49_113140 (ICDH2, Isocitrate-dehydrogenase I (IDH1)): mitochondrion during intracellular tachyzoite and tachyzoite

Other Apicomplexan Genes in this Group

• PF13_0242 isocitrate dehydrogenase (NADP), mitochondrial precursor
• PBANKA_135860 isocitrate dehydrogenase (NADP), mitochondrial precursor, putative
• PY00592 isocitrate dehydrogenase, NADP-dependent
• PY02505 isocitrate dehydrogenase, NADP-dependent, putative
• PVX_083185 isocitrate dehydrogenase [NADP], mitochondrial precursor, putative
• PCHAS_136320 isocitrate dehydrogenase (NADP), mitochondrial precursor, putative
• PKH_120870 isocitrate dehydrogenase [NADP], mitochondrial precursor, putative
• NCLIV_039280 Isocitrate dehydrogenase-like protein, related
• NCLIV_056480 hypothetical protein
• CMU_033490 isocitrate dehydrogenase, putative
• TA10850 isocitrate dehydrogenase, putative
• BBOV_III007260 isocitrate dehydrogenase, NADP-dependent family protein

Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms

• Arabidopsis thaliana- Q9SLK0: peroxisome, plasma membrane
• Arabidopsis thaliana- Q9SRZ6: cytosol, plasma membrane, apoplast
• Arabidopsis thaliana- Q8LPJ5: mitochondrion, chloroplast
• Dictyostelium discoideum- Q75JR3: extracellular space, phagocytic vesicle
• Mus musculus- E9PWT9: mitochondrion, cytosol
• Saccharomyces cerevisiae- P21954: mitochondrial nucleoid
• Saccharomyces cerevisiae- P41939: cytosol
• Saccharomyces cerevisiae- P53982: mitochondrion
• Schizosaccharomyces pombe- O14254: mitochondrion

Proteomics

Found in:

Not found in:

General Sub-Cellular Localisation Links

• PlasmoDB:
• Predicted Signal Peptide
• ExportPred
• Apicoplast transit peptide prediction, see also apicoplast-related tools below.
• Pexel/HT motif
• TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
• OrthoMCL, automatic clustering of orthologous groups of proteins