ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

Orthology

OrthoMCL

Part of OrthoMCL group OG4_11227

Localised Genes in this Group

No apicomplexan genes in this OrthoMCL group have been localised.

Other Apicomplexan Genes in this Group

• PFL2345c tat-binding protein homolog
• PBANKA_146180 tat-binding protein homolog, putative
• PY02897 tat-binding protein homolog
• PVX_101335 26S protease regulatory subunit 8, putative
• PCHAS_146410 tat-binding protein homolog, putative
• PKH_146620 tat-binding protein homolog, putative
• TGME49_061010 26S protease regulatory subunit 8, putative
• NCLIV_026270 26S proteasome regulatory subunit S4 like AAA ATpase, related
• cgd6_920 26s protease regulatory subunit 8, putative
• Chro.60119 hypothetical protein
• CMU_027300 26S protease regulatory subunit 8, putative
• TP02_0893 26S proteasome regulatory subunit, putative
• TA15700 26S proteasome ATPase subunit (Rpt6A homologue), putative
• BBOV_I000480 tat-binding protein-like protein

Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms

• Arabidopsis thaliana- Q94BQ2: proteasome complex
• Arabidopsis thaliana- Q9C5U3: proteasome complex, cytosol, plasma membrane
• Drosophila melanogaster- O18413: proteasome regulatory particle, microtubule associated complex
• Drosophila melanogaster- Q9VA54: microtubule associated complex
• Homo sapiens- P62195: proteasome complex, nucleus, cytoplasm
• Saccharomyces cerevisiae- Q01939: nucleus, proteasome regulatory particle, base subcomplex, proteasome storage granule
• Schizosaccharomyces pombe- P41836: nuclear envelope, cytosol

Proteomics

Found in:

• P. falciparum Trophozoite Silvestrini et al 2010
• P. falciparum Gametocyte Stage I and II Silvestrini et al 2010
• P. falciparum Gametocyte Stage V Silvestrini et al 2010

Not found in:

• P. falciparum Food Vacuole Lamarque et al 2008
• P. falciparum Maurer's Cleft Vincensini et al 2005

General Sub-Cellular Localisation Links

• PlasmoDB:
• Predicted Signal Peptide
• ExportPred
• Apicoplast transit peptide prediction, see also apicoplast-related tools below.
• Pexel/HT motif
• Malaria Parasite Metabolic Pathways
• MalSig, prediction of P. falciparum signal peptides
• PSEApred, prediction of P. falciparum proteins secreted into the infected erythrocyte
• PlasMit, prediction of P. falciparum mitochondrial transit peptides
• P. falciparum apicoplast leader predictors:
• PlasmoAP
• PATS
• PlasmoDraft, predictions of P. falciparum gene function based on postgenomic data
• TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
• OrthoMCL, automatic clustering of orthologous groups of proteins