ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

version 3 (curated until May 28, 2011)

NCLIV_042170 ()

PHD finger protein BR140/LIN-49, related, a gene from Neospora caninum

Compiled localisation

Who localised this protein by microscopy?

No manually curated localisations are recorded in ApiLoc, sorry.

Orthology

OrthoMCL

Part of OrthoMCL group OG4_14647

Localised Genes in this Group
    No apicomplexan genes in this OrthoMCL group have been localised.
Other Apicomplexan Genes in this Group
Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms

Amino Acid Sequence

>NCLIV_042170 PHD finger protein BR140/LIN-49, related
MGLPSAHADQTGPDSSTPSSSGPADALSSAQTTSEADSSISVWPATGICADKRGEDDRGTSRDDGVARKCSSIPSRSSAS
SSRVPLSPTMTPPLGCNPAQGGGEGERSVTLSPSDPHPSACVNNGAAAASSSSVDEKEAVASLAAVSSPGPPFKKAKASP
ALPASRASPSKSLERRASVGKRNGSSPVDSAGSGAAEGPARTPLAPGGKTGSTKFAGSEEGDTSAFSSKCTDAEGFPIPD
PLRLSTSLPVSGTVSSPARASESKPEESSGRGRPSASRRRSGSPPVGDGPVASVNALSPASSSLPSPASSLSSGPSAAFS
SVSSSSVSSSVSTTGAAATTQSPLAGSVSGSLLGNLAAWPASGPRPPSSRAALLSAALSRSLQPLASSSPLISSSSVLVS
PPMGSPYTGLSASSARPNLSLAPSTSPLNASLPPGGMAAGASPSVVAPPNLVAALRTLPSFGLQPLQSLQPRFVARPPSL
DCASLPSLPGASRPAAGLRTPSGGSGQSLPGPSEATLGAQATSPTHAGGAPAGNGGDPSNISRRRSTGTSPAPAAQLGTP
FLPGNLLQAALLSSSSPPHVALLSSLASSLPSSSPFSAPRLFRPQGLPSAGTTATAPSQRQVSPPSGAAATQPSALPASS
SAGSLANQSGSPAALGSATGADRASAKTSPETSLPQASPGETAGESPTCAERGGAGQTEGKEETPTGARTQDNSPDSSAG
DLKRTRISDPSGQQTLSSPASSFPATSSSPAASAACASSASSQRGESGADEDAVCSVCVVGECEQHNNIVFCDGCGCAVH
QFCYGVMQIPDGPWFCSLCTWLRKKDSEATARKSKERNGQREASPGAPGPSEAAAASQETRQTPSSGPEKTAPASAVDAA
ASSPSVSSVVCKLCGQGGGAMRRGPEKIWVHSCCVLYCRSGPQFRRTLQLDEPVDIRQSLSVARAMAWRCVICRKREGFP
ISCGFPGCANRLHVTCARGAKCVCVIASLWEGAVEGAGRERVWKAVFCPTHNDAVTIQAAKEFERERAFAASLPPAPTAL
SSPVASSPSQTATPQRAAEGETRAEAGGTHEPNDVSVTASPDGVAAGAETDQAQSGVSQPNLETEPSGGDTKTAQGDTLS
ARREEETKGLPNSSASATSPARPGGDADGRDAVGSSLPLSTRVAQPLPAGSALGVEESLNALQRASPPGVPSLLSSAVSS
SSLRLLPGALPASSNASAFPQTLGLGSVLHPFAGGGAHGAQNVSPELLLQKQLLLQALAGGQGQFQNAQAGKAQGLAVGG
GLASTAISPFLDAFVNPANATKKEPDAQRLASHPGLFPNLSAPLLGNFPVGGQPDARGVLPGANFPLTASGLSANASPAP
GSNLLSQYAAQPSVFRPQTVVSPSVCGLLYPNVASLGGAAAGLGGLQASGAVGAPVSGVRGGVGTQFAFFAPQLLAAQNR
VGAQQNVGLPGANCLLPGSSFPLRFPADAGPSGVPGRAGEGPDAGGAGALRAASGVQENGEASGEAAAPLSPTTALVSPS
GAGTRAAGSGGGAKADSPAAFPLEAPGQPPPVPEPPGPSAVEGEARPVFAEASSSAPLASSSQPSPLLRSSGSLRSGGKR
GGRGRSSQRMLFSSSRKSQLGGFAGHQARVGGPQVGSKDGVLGNSLAFSTQLLDGGADLLLDGLGASGAGAHGSHTPGTT
RGSRVQWGRFDALFRRVPVGPFAKNVLETLKTSQEKRVAIEEARVIEKILTSPCLCPETDSLTEPPLEDREVVEELLELY
VHQVDEALRRAREQKKRRERRARERREEQERAAAGEPRTEGGDGDGENKKRKFEETESRARDDGAPREDEKACTDKEGYG
GENGRHLDGGKHSFQDIGDAASPLPRGNEQEDASDTSRLKECAASPQLATDVGESEATATAVVASSVCTPETGNGVSVAK
PASPSRCVKPAAQEAPDTPSKRVGGETKKREREHTKAAVDDEKDEVCLPFTALVDFGPVAAWILFDAVPGEPQSAEECEV
LERLCVSGYIGGSSPPARKSQIVDSPVSTGLGTVGFPPRSPSFGASRLPSPSGDRRMVSGSGGAIAASLGVSGEVSAGGK
AAVSLFSPSQTDPPSSPLTFSTERQAKRSPSSQRLGADTAQLYSHHGVSPGHDWAGLPDDLVRCSYTGVAKAQELKGALK
KGGELVGGGPTRLLKKAFGKEREDGSVGRGDEPAETEVGSEAETDGEKRVRYRLVVKAFKTLSFYQLTYCRRRLQQVFLR
PHRHPLYRQLLQVEAQHRKRREKERQREASEKTNPEEGDEDRKIFPLFQLSTMLADQKLSSLTEKKSKQEKLAGLASKKG
AAASASKETQEARGAESLRSVASEGETGEASPDGKVSARRGEGEERRQAETELPGTSRRSTTSETARGTEGFAPLSVSVG
VAGEAPNGAAHMSPLTPNNVSTTLETPGDTAKDGSVLEDGRLVSPSPGVSPADLVPGAASPLGLPPARGLRPPPQRNGKL
QSLQDQEPDMQTGDPGASIVTVGGHRWFVKPWGWHESPYANLVESVDDFVGVQCAQFLQVSSVLSRDLRRLKLHLLQSVL
EENRQPLKVVERPQSSDHLLARYASMHRWSQLRHYIGEGVKDVALPAVSPSSASPSSSATASGRRGAGPEVPAGTTEARG
KSGSCVATPALPPHLQDCCQSPEQEQLRLSQRRQLYEAKALRVPSFPDAKTCFLLAQQEKYQQQLGCLSDSVAACAAVAG
WGLGSMGLASCSAAELERRLLLAFPSSPFSGRRTGERGAATGDLKPREGSEDVCFADFVVDLFGDGQPRQDPGRGAKELT
EILAECDANLSLFVDDEAEEENRRAQTQPVLLAGGVQKVQPALPAVAYQEDRGDAGLEARPERPKTDEAADGEPGAKPEN
EETGANATAVSPQTSPASPTPHKPDANAPAPADSKNGAVAAPAVASAAAVASPVSPLPPAAPVATTAGSVLDALLGAAGG
VGACCVCWWAERSNLNPILSCVRCLVHVHKNCYGVGKMGEAVEGDDWICRRCELEKKGLGTQWLVAFEPMKIRCQICGTG
GGALKPTTDGGWVHLFCVLWLLPEVACAEFSALEPWNLDGVVPWRRETRCGLCDQSGGVCVRCASVGCEVCFHPMCAWLA
GLHCEAESLRGLFLPFRGAVDRCFPRLVIKAFCFKHSPEFLADGRRRSSAVQGSLRMRRYVTRDHRPDLFNANDRRSGGL
LFKRGGGGGRRGNASAGSVSFGAQSRARTQATATVPKPDLPALPAGTSPAAPDPGAAGGGPAGADAQPATGTGAQVPAAT
AVGSDTAKEVPGDGDSKASPGKPPQPPASPSASASSSAASPGVVGEKEGYAEASANPPASPVAEAGAPGPEKAAEETETP
ATTVAPLASSARVGGQPVPAEKGSDVVTGEAESLGTGFLTRAILEEKDLYDDHSCAVCLLPRITCTSSNPFFHCQRCGLC
VHRQCYGIRKEHLPLHLRPDLLRKIKGRKMRRVSASPEVEAETERRSWAGDGGASDAPQSGERQRDETGGEAEPGPAGED
APQASGDVCGSPDRNLPGSPSSGASAEGRTLEGSTEAALTASGERNQLREGEDLAAAMDASERKGDASPTGEADGDGEER
KEGSKREREDEDETSCAESDEDENVGRYKPTPFLCEACTWLPPTEKPFCLLCPRRGGAFKLVAPSISSSLAAPSSETPLF
AHMTCCLWTPGVDVAATPALSPIVGVERVLEEQQNVIIQHLQRKRQVPGVERKSEDVANDAVSALAASEGPCAEARKSEG
DDAGARERRESGGQTGAKPGDGESEETDQQLQPEKAHTGGSAEKKPEDKPLAPLSDEDVAPLLWTECEVCGSAYGFCTKC
AQKGCSRYFHPLCAQLKGAFMEMTEQPGRRFTAVAFCTHHSRVRNQISPSVRLFLRLRSFLELSKLLVGQVSRRERVKRL
WLRKRRELLDREFPIDSTLSSSASSPLALPPVASSASSASVPSPETVSKPSASPLSPSARDGSPVSEDKPTEQASRPPSA
AVASSPCSSLATPVVSLLPDLMLINALSSSSPKFSLSNGDEAKKAEDVSLIASFDPALIAAAAQAAASQVVGERRCAKDA
VELHALASSDVSEPIEKMRDACTSHQSGPFGFRAVDEGGSRAPPEDAREAEPAGENGDDGEEDPEQAERADEQDDGGDSM
SSRKKRRESASGRGSDLVLPGGRKGGDSALCSPPSLAGASPSSRTTPRASAEVKSRERSGLVRGEKDDAERLRSRVLALP
ASKRGAPEAAGPRGKTRDEERGSRAPGLRGPSTAFGSQPKRDGARRKLAEEAARAAASATKEQRAASFAAVITQYLERVK
AQREEPNERRDSEEERLPIVDERTGFKCTCLSEVELQGLVQVVDQTTKASFAGEDGCPAQRKGRPTNRQRLVLLLSDASP
RSRHEAILLAHQLKQTWEDILIGSIDKELVTLKNRMLSERPDVAEEPSDKARFSGRPATASLQSHGSTTPPEDVPPSAAR
AFLPSVPGSPANKTLRVRDKADGRVRRQTPTPSTQIRQELPASFADSKSSLSASFEAKRRRKR

Proteomics

Found in:

Not found in:

Gene-Specific Links for NCLIV_042170

General Sub-Cellular Localisation Links

  • TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
  • OrthoMCL, automatic clustering of orthologous groups of proteins