ApiLoc - A database of published protein sub-cellular localisation in Apicomplexa

version 3 (curated until May 28, 2011)

cgd1_3080 ()

splicing factor U2AF like SnRNP auxilary factor large subunit, RRM domain, a gene from Cryptosporidium parvum

Compiled localisation

Who localised this protein by microscopy?

No manually curated localisations are recorded in ApiLoc, sorry.

Orthology

OrthoMCL

Part of OrthoMCL group OG4_20130

Localised Genes in this Group
    No apicomplexan genes in this OrthoMCL group have been localised.
Other Apicomplexan Genes in this Group
Non-Apicomplexan Genes in this OrthoMCL Group with Gene Ontology 'Inferred from Direct Assay (IDA)' Cellular Component Terms
    There are no non-apicomplexan genes that have manually annotated evidence codes.

Amino Acid Sequence

>cgd1_3080 splicing factor U2AF like SnRNP auxilary factor large subunit, RRM domain
TFLFRCIKKAGGFQKLAQSEGKEPTPVFYDGFQWVAKTGSTASMDPATMNNTRRFRRLYFGNLPINLGLTESSFQQIVWQ
EMALRGLCLNPNENPILCVWFAQKKGNYGFVEFRTVEETEKALQLDGFACMGSKIKVSRPNDYSQALQSSSSSTAVGGSG
TNIQSPYNSVLNPINNLNSHTTINGAITKDNAFYLGQETALQLLFTLEDTYSLGTRNLDSKVLRITNVLDPCQIQDPEEC
REIKRDFCDGIQYKDSIISSRIITIDDISRLCQELAEKDIQLEPADILLEFDSNTNLQLSVSAMSIANYNNKIPKMNLFD
EDFYHNHLKG

Proteomics

Found in:

Not found in:

Gene-Specific Links for cgd1_3080

General Sub-Cellular Localisation Links

  • TargetP, prediction of signal peptides, as well as chloroplast and mitochondrial transit peptides
  • OrthoMCL, automatic clustering of orthologous groups of proteins